Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 DDX43P3-201ENST00000441064 443 ntBASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 TNXA-203ENST00000507684 2038 ntBASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTFDC1Q9BY42 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 AC011467.4-201ENST00000594891 528 ntBASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 AC105339.1-204ENST00000636249 355 ntBASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.35■■□□□ 1.01
RTFDC1Q9BY42 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 IGHV3-52-201ENST00000519770 353 ntBASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 AC004835.2-201ENST00000603762 682 ntBASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTFDC1Q9BY42 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AL121761.2-201ENST00000598007 1648 ntBASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AL035633.1-201ENST00000406139 838 ntBASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AC004461.1-201ENST00000412461 403 ntBASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AC002558.1-201ENST00000488906 803 ntBASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 HLA-J-203ENST00000494367 1087 ntBASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 AC116407.2-201ENST00000613639 860 ntBASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTFDC1Q9BY42 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms