Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE1Q99829 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CPNE1Q99829 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE1Q99829 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE1Q99829 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE1Q99829 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CPNE1Q99829 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE1Q99829 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.7■□□□□ 0.42
CPNE1Q99829 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE1Q99829 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 AC010203.1-204ENST00000548782 407 ntBASIC17.7■□□□□ 0.42
CPNE1Q99829 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CPNE1Q99829 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CPNE1Q99829 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CPNE1Q99829 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE1Q99829 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPNE1Q99829 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE1Q99829 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE1Q99829 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.69■□□□□ 0.42
CPNE1Q99829 LYSMD4-203ENST00000378904 2122 ntBASIC17.69■□□□□ 0.42
CPNE1Q99829 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE1Q99829 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE1Q99829 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 IGHGP-201ENST00000390555 1178 ntBASIC17.69■□□□□ 0.42
CPNE1Q99829 AC093827.2-201ENST00000512654 315 ntBASIC17.69■□□□□ 0.42
CPNE1Q99829 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
CPNE1Q99829 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.69■□□□□ 0.42
CPNE1Q99829 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE1Q99829 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE1Q99829 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE1Q99829 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CPNE1Q99829 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPNE1Q99829 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE1Q99829 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CPNE1Q99829 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE1Q99829 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE1Q99829 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
CPNE1Q99829 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE1Q99829 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CPNE1Q99829 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPNE1Q99829 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPNE1Q99829 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE1Q99829 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE1Q99829 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPNE1Q99829 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE1Q99829 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms