Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 MIR663A-201ENST00000385250 93 ntBASIC16.68■□□□□ 0.26
NR1H4Q96RI1 GPX1P1-201ENST00000388829 606 ntBASIC16.68■□□□□ 0.26
NR1H4Q96RI1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 CDCA4P2-201ENST00000441182 718 ntBASIC16.68■□□□□ 0.26
NR1H4Q96RI1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 AC092384.3-202ENST00000564646 2873 ntBASIC16.68■□□□□ 0.26
NR1H4Q96RI1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 PAUPAR-201ENST00000630360 2965 ntBASIC16.67■□□□□ 0.26
NR1H4Q96RI1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 AC116353.5-201ENST00000638148 1699 ntBASIC16.67■□□□□ 0.26
NR1H4Q96RI1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 MIR935-201ENST00000401179 91 ntBASIC16.67■□□□□ 0.26
NR1H4Q96RI1 AC026185.1-201ENST00000445748 174 ntBASIC16.67■□□□□ 0.26
NR1H4Q96RI1 AL160286.2-201ENST00000567150 934 ntBASIC16.67■□□□□ 0.26
NR1H4Q96RI1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NR1H4Q96RI1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.66■□□□□ 0.26
NR1H4Q96RI1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 AL050303.2-201ENST00000619798 666 ntBASIC16.66■□□□□ 0.26
NR1H4Q96RI1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NR1H4Q96RI1 LINC02228-204ENST00000642115 2962 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms