Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.94■□□□□ 0.94
NEK1Q96PY6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEK1Q96PY6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 DRAXINP1-201ENST00000437611 948 ntBASIC20.93■□□□□ 0.94
NEK1Q96PY6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 TPSP2-201ENST00000561760 610 ntBASIC20.93■□□□□ 0.94
NEK1Q96PY6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.93■□□□□ 0.94
NEK1Q96PY6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEK1Q96PY6 SIRPAP1-201ENST00000448467 1770 ntBASIC20.92■□□□□ 0.94
NEK1Q96PY6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 AP002414.4-201ENST00000589764 1148 ntBASIC20.92■□□□□ 0.94
NEK1Q96PY6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.92■□□□□ 0.94
NEK1Q96PY6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NEK1Q96PY6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 VENTXP7-201ENST00000475503 772 ntBASIC20.91■□□□□ 0.94
NEK1Q96PY6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NEK1Q96PY6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 AC108860.2-201ENST00000562760 2183 ntBASIC20.91■□□□□ 0.94
NEK1Q96PY6 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.91■□□□□ 0.94
NEK1Q96PY6 AC233702.3-201ENST00000578656 1387 ntBASIC20.91■□□□□ 0.94
NEK1Q96PY6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms