Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AC002558.1-201ENST00000488906 803 ntBASIC14.71□□□□□ -0.05
GAFA1Q96PS6 KRT18P56-201ENST00000507275 550 ntBASIC14.71□□□□□ -0.05
GAFA1Q96PS6 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 PRELID1P1-202ENST00000567272 903 ntBASIC14.71□□□□□ -0.05
GAFA1Q96PS6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 AC019129.2-201ENST00000609837 1235 ntBASIC14.71□□□□□ -0.05
GAFA1Q96PS6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GAFA1Q96PS6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
GAFA1Q96PS6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.71□□□□□ -0.06
GAFA1Q96PS6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
GAFA1Q96PS6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GAFA1Q96PS6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
GAFA1Q96PS6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 CLEC4GP1-201ENST00000596555 870 ntBASIC14.7□□□□□ -0.06
GAFA1Q96PS6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 LINC00896-202ENST00000609602 2128 ntBASIC14.7□□□□□ -0.06
GAFA1Q96PS6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 AC012313.10-201ENST00000623509 926 ntBASIC14.7□□□□□ -0.06
GAFA1Q96PS6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GAFA1Q96PS6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 AC103564.2-201ENST00000432853 1299 ntBASIC14.69□□□□□ -0.06
GAFA1Q96PS6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.69□□□□□ -0.06
GAFA1Q96PS6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms