Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.89■□□□□ 0.29
ITCHQ96J02 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.89■□□□□ 0.29
ITCHQ96J02 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ITCHQ96J02 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.89■□□□□ 0.29
ITCHQ96J02 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.89■□□□□ 0.29
ITCHQ96J02 AC024563.2-201ENST00000603282 481 ntBASIC16.89■□□□□ 0.29
ITCHQ96J02 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
ITCHQ96J02 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ITCHQ96J02 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ITCHQ96J02 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITCHQ96J02 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITCHQ96J02 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITCHQ96J02 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ITCHQ96J02 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ITCHQ96J02 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITCHQ96J02 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
ITCHQ96J02 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITCHQ96J02 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ITCHQ96J02 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ITCHQ96J02 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.88■□□□□ 0.29
ITCHQ96J02 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ITCHQ96J02 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 KRT89P-201ENST00000620027 1478 ntBASIC16.88■□□□□ 0.29
ITCHQ96J02 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ITCHQ96J02 ECEL1P3-201ENST00000427961 737 ntBASIC16.88■□□□□ 0.29
ITCHQ96J02 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.88■□□□□ 0.29
ITCHQ96J02 AC034232.1-201ENST00000506026 1064 ntBASIC16.88■□□□□ 0.29
ITCHQ96J02 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.88■□□□□ 0.29
ITCHQ96J02 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.88■□□□□ 0.29
ITCHQ96J02 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.88■□□□□ 0.29
ITCHQ96J02 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.88■□□□□ 0.29
ITCHQ96J02 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ITCHQ96J02 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.88■□□□□ 0.29
ITCHQ96J02 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ITCHQ96J02 AC011676.5-201ENST00000624864 2660 ntBASIC16.88■□□□□ 0.29
ITCHQ96J02 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ITCHQ96J02 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ITCHQ96J02 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITCHQ96J02 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.87■□□□□ 0.29
ITCHQ96J02 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ITCHQ96J02 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ITCHQ96J02 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.87■□□□□ 0.29
ITCHQ96J02 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.87■□□□□ 0.29
ITCHQ96J02 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 MIR4497-201ENST00000583208 89 ntBASIC16.87■□□□□ 0.29
ITCHQ96J02 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.87■□□□□ 0.29
ITCHQ96J02 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.87■□□□□ 0.29
ITCHQ96J02 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.87■□□□□ 0.29
ITCHQ96J02 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.87■□□□□ 0.29
ITCHQ96J02 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ITCHQ96J02 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ITCHQ96J02 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.87■□□□□ 0.29
ITCHQ96J02 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.87■□□□□ 0.29
ITCHQ96J02 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ITCHQ96J02 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITCHQ96J02 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ITCHQ96J02 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ITCHQ96J02 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ITCHQ96J02 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITCHQ96J02 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms