Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA4DQ92854 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA4DQ92854 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.02■□□□□ 0.64
SEMA4DQ92854 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA4DQ92854 AC009533.2-201ENST00000543664 586 ntBASIC19.02■□□□□ 0.64
SEMA4DQ92854 AC011467.2-201ENST00000598425 242 ntBASIC19.02■□□□□ 0.64
SEMA4DQ92854 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA4DQ92854 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.02■□□□□ 0.64
SEMA4DQ92854 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA4DQ92854 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEMA4DQ92854 AL645608.8-201ENST00000606034 2086 ntBASIC19.02■□□□□ 0.63
SEMA4DQ92854 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SEMA4DQ92854 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SEMA4DQ92854 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
SEMA4DQ92854 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 MINOS1P3-201ENST00000457048 203 ntBASIC19.01■□□□□ 0.63
SEMA4DQ92854 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SEMA4DQ92854 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEMA4DQ92854 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19■□□□□ 0.63
SEMA4DQ92854 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19■□□□□ 0.63
SEMA4DQ92854 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 RCN1P2-201ENST00000398357 915 ntBASIC19■□□□□ 0.63
SEMA4DQ92854 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19■□□□□ 0.63
SEMA4DQ92854 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19■□□□□ 0.63
SEMA4DQ92854 AC122714.2-201ENST00000502787 707 ntBASIC19■□□□□ 0.63
SEMA4DQ92854 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19■□□□□ 0.63
SEMA4DQ92854 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SEMA4DQ92854 AC012615.1-201ENST00000565797 1299 ntBASIC19■□□□□ 0.63
SEMA4DQ92854 AL049757.1-201ENST00000616842 1596 ntBASIC19■□□□□ 0.63
SEMA4DQ92854 AL138688.1-201ENST00000624851 1594 ntBASIC19■□□□□ 0.63
SEMA4DQ92854 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEMA4DQ92854 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19■□□□□ 0.63
SEMA4DQ92854 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 LYSMD4-203ENST00000378904 2122 ntBASIC18.99■□□□□ 0.63
SEMA4DQ92854 FAM220CP-201ENST00000395253 831 ntBASIC18.99■□□□□ 0.63
SEMA4DQ92854 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 AC104819.1-201ENST00000504587 486 ntBASIC18.99■□□□□ 0.63
SEMA4DQ92854 AC096582.2-201ENST00000510860 516 ntBASIC18.99■□□□□ 0.63
SEMA4DQ92854 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEMA4DQ92854 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.99■□□□□ 0.63
SEMA4DQ92854 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms