Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.33■□□□□ 0.2
CNOT9Q92600 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.33■□□□□ 0.2
CNOT9Q92600 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.33■□□□□ 0.2
CNOT9Q92600 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNOT9Q92600 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.33■□□□□ 0.2
CNOT9Q92600 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.33■□□□□ 0.2
CNOT9Q92600 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.33■□□□□ 0.2
CNOT9Q92600 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT9Q92600 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.33■□□□□ 0.2
CNOT9Q92600 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.33■□□□□ 0.2
CNOT9Q92600 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT9Q92600 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CNOT9Q92600 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CNOT9Q92600 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT9Q92600 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CNOT9Q92600 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT9Q92600 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT9Q92600 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT9Q92600 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT9Q92600 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CNOT9Q92600 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CNOT9Q92600 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT9Q92600 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CNOT9Q92600 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.32■□□□□ 0.2
CNOT9Q92600 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.32■□□□□ 0.2
CNOT9Q92600 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.32■□□□□ 0.2
CNOT9Q92600 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.32■□□□□ 0.2
CNOT9Q92600 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT9Q92600 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CNOT9Q92600 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CNOT9Q92600 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT9Q92600 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CNOT9Q92600 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 AL031133.1-201ENST00000406807 723 ntBASIC16.31■□□□□ 0.2
CNOT9Q92600 TSPY22P-201ENST00000427496 604 ntBASIC16.31■□□□□ 0.2
CNOT9Q92600 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT9Q92600 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT9Q92600 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 AL049597.2-201ENST00000565575 961 ntBASIC16.31■□□□□ 0.2
CNOT9Q92600 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT9Q92600 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CNOT9Q92600 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.31■□□□□ 0.2
CNOT9Q92600 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT9Q92600 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.31■□□□□ 0.2
CNOT9Q92600 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 PRORSD1P-202ENST00000563365 2154 ntBASIC16.31■□□□□ 0.2
CNOT9Q92600 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 AC141586.5-201ENST00000624546 2050 ntBASIC16.31■□□□□ 0.2
CNOT9Q92600 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT9Q92600 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT9Q92600 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT9Q92600 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT9Q92600 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT9Q92600 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT9Q92600 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT9Q92600 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms