Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 AC073195.1-201ENST00000607241 877 ntBASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKAP2Q8WWK9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 AL596257.1-201ENST00000641463 2694 ntBASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKAP2Q8WWK9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 RNF216P1-203ENST00000404404 2427 ntBASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKAP2Q8WWK9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CKAP2Q8WWK9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CKAP2Q8WWK9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms