Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 KRT8P47-201ENST00000604727 1398 ntBASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 NFIC-211ENST00000641145 8399 ntBASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 AC104076.2-201ENST00000448912 469 ntBASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 AC063952.2-201ENST00000498792 1227 ntBASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 RN7SL850P-201ENST00000579959 291 ntBASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 DDX43P3-201ENST00000441064 443 ntBASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 AC112698.1-201ENST00000510299 916 ntBASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 AC022616.7-201ENST00000525383 220 ntBASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 AC133963.1-201ENST00000504166 1679 ntBASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAF3IP1Q8TDR0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 AC005332.3-201ENST00000589904 676 ntBASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP1Q8TDR0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAF3IP1Q8TDR0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAF3IP1Q8TDR0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP1Q8TDR0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP1Q8TDR0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP1Q8TDR0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP1Q8TDR0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRAF3IP1Q8TDR0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP1Q8TDR0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP1Q8TDR0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms