Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 MYCLP1-201ENST00000372451 1075 ntBASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 AC093512.1-201ENST00000617969 520 ntBASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHDC9Q8NEP7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 AC109322.1-201ENST00000524499 1264 ntBASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KLHDC9Q8NEP7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 AC092919.2-201ENST00000623631 1645 ntBASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KLHDC9Q8NEP7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 ADH5P3-201ENST00000433842 1137 ntBASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 PAWRP1-201ENST00000451083 565 ntBASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 AC023141.5-201ENST00000458585 616 ntBASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 ACTL9-202ENST00000612068 1252 ntBASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 AC006116.8-202ENST00000587620 1550 ntBASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHDC9Q8NEP7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms