Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 AC026471.1-201ENST00000564629 3026 ntBASIC14.34□□□□□ -0.11
LINC00311Q8N616 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 IGHV3-47-201ENST00000425060 335 ntBASIC14.34□□□□□ -0.11
LINC00311Q8N616 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 AC111152.3-201ENST00000569699 673 ntBASIC14.34□□□□□ -0.11
LINC00311Q8N616 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LINC00311Q8N616 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00311Q8N616 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00311Q8N616 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00311Q8N616 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00311Q8N616 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00311Q8N616 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 SIRPAP1-201ENST00000448467 1770 ntBASIC14.33□□□□□ -0.12
LINC00311Q8N616 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 POM121L3P-201ENST00000419331 1163 ntBASIC14.33□□□□□ -0.12
LINC00311Q8N616 LINC00265-3P-201ENST00000447588 903 ntBASIC14.33□□□□□ -0.12
LINC00311Q8N616 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 AL049757.1-201ENST00000616842 1596 ntBASIC14.33□□□□□ -0.12
LINC00311Q8N616 LYSMD4-203ENST00000378904 2122 ntBASIC14.33□□□□□ -0.12
LINC00311Q8N616 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LINC00311Q8N616 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00311Q8N616 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00311Q8N616 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00311Q8N616 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00311Q8N616 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC00311Q8N616 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 NSUN5P1-202ENST00000421140 1535 ntBASIC14.32□□□□□ -0.12
LINC00311Q8N616 NSUN5P2-203ENST00000457352 1529 ntBASIC14.32□□□□□ -0.12
LINC00311Q8N616 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00311Q8N616 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00311Q8N616 MINOS1P3-201ENST00000457048 203 ntBASIC14.32□□□□□ -0.12
LINC00311Q8N616 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00311Q8N616 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.32□□□□□ -0.12
LINC00311Q8N616 AC012615.1-201ENST00000565797 1299 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms