Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LDB1Q86U70 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
LDB1Q86U70 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LDB1Q86U70 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 DDX43P3-201ENST00000441064 443 ntBASIC17.67■□□□□ 0.42
LDB1Q86U70 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB1Q86U70 KRT18P35-201ENST00000510488 1269 ntBASIC17.67■□□□□ 0.42
LDB1Q86U70 GUSBP12-201ENST00000513727 720 ntBASIC17.67■□□□□ 0.42
LDB1Q86U70 KRT8P26-201ENST00000534154 1276 ntBASIC17.67■□□□□ 0.42
LDB1Q86U70 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.67■□□□□ 0.42
LDB1Q86U70 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.67■□□□□ 0.42
LDB1Q86U70 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LDB1Q86U70 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB1Q86U70 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.66■□□□□ 0.42
LDB1Q86U70 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB1Q86U70 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LDB1Q86U70 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB1Q86U70 AC010460.3-201ENST00000511359 1579 ntBASIC17.66■□□□□ 0.42
LDB1Q86U70 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB1Q86U70 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB1Q86U70 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LDB1Q86U70 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LDB1Q86U70 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LDB1Q86U70 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LDB1Q86U70 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 PCED1CP-201ENST00000419887 785 ntBASIC17.66■□□□□ 0.42
LDB1Q86U70 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
LDB1Q86U70 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.66■□□□□ 0.42
LDB1Q86U70 AC091607.1-201ENST00000490318 1060 ntBASIC17.66■□□□□ 0.42
LDB1Q86U70 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.66■□□□□ 0.42
LDB1Q86U70 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB1Q86U70 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.66■□□□□ 0.42
LDB1Q86U70 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LDB1Q86U70 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.66■□□□□ 0.42
LDB1Q86U70 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB1Q86U70 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.66■□□□□ 0.42
LDB1Q86U70 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.66■□□□□ 0.42
LDB1Q86U70 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LDB1Q86U70 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.66■□□□□ 0.42
LDB1Q86U70 AC016734.2-201ENST00000624325 1377 ntBASIC17.66■□□□□ 0.42
LDB1Q86U70 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LDB1Q86U70 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB1Q86U70 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB1Q86U70 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 HLA-J-201ENST00000462773 1622 ntBASIC17.65■□□□□ 0.42
LDB1Q86U70 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.65■□□□□ 0.42
LDB1Q86U70 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.65■□□□□ 0.42
LDB1Q86U70 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LDB1Q86U70 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.65■□□□□ 0.42
LDB1Q86U70 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.65■□□□□ 0.42
LDB1Q86U70 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
LDB1Q86U70 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.65■□□□□ 0.42
LDB1Q86U70 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LDB1Q86U70 AC116407.4-201ENST00000623319 1061 ntBASIC17.65■□□□□ 0.42
LDB1Q86U70 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LDB1Q86U70 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.65■□□□□ 0.42
LDB1Q86U70 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LDB1Q86U70 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
LDB1Q86U70 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LDB1Q86U70 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LDB1Q86U70 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LDB1Q86U70 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms