Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 UPK3BP1-201ENST00000428678 509 ntBASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 DRAXINP1-201ENST00000437611 948 ntBASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 AP002383.4-201ENST00000442518 975 ntBASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 AL353801.3-201ENST00000609898 542 ntBASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNE3Q6ZMZ3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 AC097374.2-201ENST00000618617 1306 ntBASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 Z69720.1-201ENST00000601483 472 ntBASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNE3Q6ZMZ3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 LINC00265-3P-201ENST00000447588 903 ntBASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 TPSP2-201ENST00000561760 610 ntBASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.83■□□□□ 0.93
SYNE3Q6ZMZ3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.83■□□□□ 0.92
SYNE3Q6ZMZ3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SYNE3Q6ZMZ3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNE3Q6ZMZ3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SYNE3Q6ZMZ3 FZD10-202ENST00000539839 3282 ntBASIC20.83■□□□□ 0.92
SYNE3Q6ZMZ3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SYNE3Q6ZMZ3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNE3Q6ZMZ3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 AC096633.1-201ENST00000422446 749 ntBASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 AL845331.1-201ENST00000424978 1190 ntBASIC20.82■□□□□ 0.92
SYNE3Q6ZMZ3 ATP5G2P1-201ENST00000433580 426 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms