Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT39Q6A163 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT39Q6A163 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.11■□□□□ 0.65
KRT39Q6A163 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.11■□□□□ 0.65
KRT39Q6A163 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT39Q6A163 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRT39Q6A163 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KRT39Q6A163 KRT17P6-201ENST00000453795 1220 ntBASIC19.11■□□□□ 0.65
KRT39Q6A163 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.11■□□□□ 0.65
KRT39Q6A163 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT39Q6A163 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KRT39Q6A163 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.11■□□□□ 0.65
KRT39Q6A163 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KRT39Q6A163 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.11■□□□□ 0.65
KRT39Q6A163 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KRT39Q6A163 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.11■□□□□ 0.65
KRT39Q6A163 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KRT39Q6A163 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KRT39Q6A163 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT39Q6A163 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT39Q6A163 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
KRT39Q6A163 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT39Q6A163 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KRT39Q6A163 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT39Q6A163 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT39Q6A163 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
KRT39Q6A163 IGHV3-47-201ENST00000425060 335 ntBASIC19.1■□□□□ 0.65
KRT39Q6A163 AC122714.2-201ENST00000502787 707 ntBASIC19.1■□□□□ 0.65
KRT39Q6A163 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.1■□□□□ 0.65
KRT39Q6A163 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT39Q6A163 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 AC092119.3-201ENST00000612618 583 ntBASIC19.1■□□□□ 0.65
KRT39Q6A163 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT39Q6A163 AC093458.2-201ENST00000623150 629 ntBASIC19.1■□□□□ 0.65
KRT39Q6A163 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT39Q6A163 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT39Q6A163 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT39Q6A163 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KRT39Q6A163 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT39Q6A163 AL138688.1-201ENST00000624851 1594 ntBASIC19.1■□□□□ 0.65
KRT39Q6A163 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT39Q6A163 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT39Q6A163 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT39Q6A163 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT39Q6A163 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT39Q6A163 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
KRT39Q6A163 FAM220CP-201ENST00000395253 831 ntBASIC19.09■□□□□ 0.65
KRT39Q6A163 UPK3BP1-201ENST00000428678 509 ntBASIC19.09■□□□□ 0.65
KRT39Q6A163 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT39Q6A163 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT39Q6A163 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT39Q6A163 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT39Q6A163 AC092329.2-201ENST00000598402 547 ntBASIC19.09■□□□□ 0.65
KRT39Q6A163 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT39Q6A163 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT39Q6A163 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT39Q6A163 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KRT39Q6A163 NSUN5P1-202ENST00000421140 1535 ntBASIC19.09■□□□□ 0.65
KRT39Q6A163 NSUN5P2-203ENST00000457352 1529 ntBASIC19.09■□□□□ 0.65
KRT39Q6A163 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT39Q6A163 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms