Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AC136632.2-201ENST00000512891 861 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AC116407.2-201ENST00000613639 860 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 MIR1199-201ENST00000621445 119 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AC004706.3-202ENST00000621574 984 ntBASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNFT1Q5M7Z0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 ELK2BP-201ENST00000415014 1224 ntBASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 AC005593.1-201ENST00000624894 515 ntBASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNFT1Q5M7Z0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 AC003669.1-201ENST00000334569 611 ntBASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 DDX43P3-201ENST00000441064 443 ntBASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 AC108751.1-201ENST00000490852 363 ntBASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 STK25P1-201ENST00000585406 838 ntBASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 BX276092.7-203ENST00000637198 1536 ntBASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNFT1Q5M7Z0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms