Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 BX276092.7-203ENST00000637198 1536 ntBASIC17.09■□□□□ 0.33
HLA-BQ31612 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 AC009336.1-201ENST00000608941 1553 ntBASIC17.09■□□□□ 0.33
HLA-BQ31612 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-BQ31612 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-BQ31612 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HLA-BQ31612 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-BQ31612 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-BQ31612 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-BQ31612 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-BQ31612 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-BQ31612 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-BQ31612 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-BQ31612 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-BQ31612 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.08■□□□□ 0.33
HLA-BQ31612 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
HLA-BQ31612 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-BQ31612 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-BQ31612 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-BQ31612 TSEN15P1-201ENST00000423257 515 ntBASIC17.08■□□□□ 0.32
HLA-BQ31612 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-BQ31612 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-BQ31612 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-BQ31612 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HLA-BQ31612 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 AC011467.4-201ENST00000594891 528 ntBASIC17.08■□□□□ 0.32
HLA-BQ31612 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HLA-BQ31612 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HLA-BQ31612 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-BQ31612 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-BQ31612 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-BQ31612 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-BQ31612 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-BQ31612 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-BQ31612 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-BQ31612 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-BQ31612 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-BQ31612 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-BQ31612 AC091812.2-201ENST00000619081 385 ntBASIC17.07■□□□□ 0.32
HLA-BQ31612 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
HLA-BQ31612 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HLA-BQ31612 AC100803.2-201ENST00000562459 1963 ntBASIC17.07■□□□□ 0.32
HLA-BQ31612 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 AC009949.1-201ENST00000623048 1830 ntBASIC17.07■□□□□ 0.32
HLA-BQ31612 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-BQ31612 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-BQ31612 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-BQ31612 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-BQ31612 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-BQ31612 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-BQ31612 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-BQ31612 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-BQ31612 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-BQ31612 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms