Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNA1P78396 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNA1P78396 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.04■□□□□ 0.8
CCNA1P78396 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.04■□□□□ 0.8
CCNA1P78396 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCNA1P78396 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.03■□□□□ 0.8
CCNA1P78396 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CCNA1P78396 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 ACTG1P14-201ENST00000446382 1122 ntBASIC20.03■□□□□ 0.8
CCNA1P78396 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.03■□□□□ 0.8
CCNA1P78396 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.03■□□□□ 0.8
CCNA1P78396 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
CCNA1P78396 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.03■□□□□ 0.8
CCNA1P78396 AC007064.4-201ENST00000637740 555 ntBASIC20.03■□□□□ 0.8
CCNA1P78396 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.03■□□□□ 0.8
CCNA1P78396 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNA1P78396 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.02■□□□□ 0.8
CCNA1P78396 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CCNA1P78396 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 CROCCP3-202ENST00000420820 1947 ntBASIC20.02■□□□□ 0.8
CCNA1P78396 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.02■□□□□ 0.8
CCNA1P78396 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.02■□□□□ 0.8
CCNA1P78396 LINC00982-205ENST00000420957 435 ntBASIC20.02■□□□□ 0.8
CCNA1P78396 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.02■□□□□ 0.8
CCNA1P78396 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 AC002558.1-201ENST00000488906 803 ntBASIC20.02■□□□□ 0.8
CCNA1P78396 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 KRT19P2-202ENST00000557173 1012 ntBASIC20.02■□□□□ 0.8
CCNA1P78396 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.02■□□□□ 0.8
CCNA1P78396 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.02■□□□□ 0.8
CCNA1P78396 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNA1P78396 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCNA1P78396 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCNA1P78396 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCNA1P78396 RNF165-205ENST00000588679 2904 ntBASIC20.02■□□□□ 0.79
CCNA1P78396 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.02■□□□□ 0.79
CCNA1P78396 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCNA1P78396 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.02■□□□□ 0.79
CCNA1P78396 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCNA1P78396 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCNA1P78396 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CCNA1P78396 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNA1P78396 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.01■□□□□ 0.79
CCNA1P78396 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCNA1P78396 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.01■□□□□ 0.79
CCNA1P78396 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.01■□□□□ 0.79
CCNA1P78396 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNA1P78396 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCNA1P78396 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.01■□□□□ 0.79
CCNA1P78396 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.01■□□□□ 0.79
CCNA1P78396 RHOQP3-201ENST00000437982 621 ntBASIC20.01■□□□□ 0.79
CCNA1P78396 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
CCNA1P78396 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNA1P78396 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.01■□□□□ 0.79
CCNA1P78396 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.01■□□□□ 0.79
CCNA1P78396 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCNA1P78396 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 AC009949.1-201ENST00000623048 1830 ntBASIC20.01■□□□□ 0.79
CCNA1P78396 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNA1P78396 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNA1P78396 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNA1P78396 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCNA1P78396 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms