Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 GUK1-208ENST00000366728 842 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 AC092437.1-201ENST00000624794 1048 ntBASIC13.33□□□□□ -0.28
HIST1H2BCP62807 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 AC023908.3-201ENST00000564211 3047 ntBASIC13.33□□□□□ -0.28
HIST1H2BCP62807 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BCP62807 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H2BCP62807 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 KRT18P41-201ENST00000518924 1277 ntBASIC13.31□□□□□ -0.28
HIST1H2BCP62807 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 NTF6A-201ENST00000591175 560 ntBASIC13.31□□□□□ -0.28
HIST1H2BCP62807 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BCP62807 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms