Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.65■□□□□ 0.26
RPS3AP61247 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RPS3AP61247 MTMR9LP-203ENST00000426597 1545 ntBASIC16.65■□□□□ 0.26
RPS3AP61247 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
RPS3AP61247 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RPS3AP61247 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
RPS3AP61247 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RPS3AP61247 AC112907.2-201ENST00000448639 330 ntBASIC16.64■□□□□ 0.25
RPS3AP61247 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 MIR3917-201ENST00000580971 93 ntBASIC16.64■□□□□ 0.25
RPS3AP61247 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.64■□□□□ 0.25
RPS3AP61247 AC010240.3-201ENST00000607688 395 ntBASIC16.64■□□□□ 0.25
RPS3AP61247 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RPS3AP61247 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.64■□□□□ 0.25
RPS3AP61247 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RPS3AP61247 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS3AP61247 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RPS3AP61247 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS3AP61247 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RPS3AP61247 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS3AP61247 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS3AP61247 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RPS3AP61247 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS3AP61247 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS3AP61247 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS3AP61247 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS3AP61247 SLC25A6P5-201ENST00000435663 894 ntBASIC16.63■□□□□ 0.25
RPS3AP61247 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.63■□□□□ 0.25
RPS3AP61247 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.63■□□□□ 0.25
RPS3AP61247 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RPS3AP61247 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.63■□□□□ 0.25
RPS3AP61247 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.63■□□□□ 0.25
RPS3AP61247 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS3AP61247 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.62■□□□□ 0.25
RPS3AP61247 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.62■□□□□ 0.25
RPS3AP61247 KRT18P41-201ENST00000518924 1277 ntBASIC16.62■□□□□ 0.25
RPS3AP61247 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms