Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC243591.1-201ENST00000452967 1364 ntBASIC19.54■□□□□ 0.72
GPC3P51654 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GPC3P51654 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
GPC3P51654 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
GPC3P51654 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GPC3P51654 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GPC3P51654 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
GPC3P51654 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.53■□□□□ 0.72
GPC3P51654 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.53■□□□□ 0.72
GPC3P51654 AL139288.1-201ENST00000623748 933 ntBASIC19.53■□□□□ 0.72
GPC3P51654 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
GPC3P51654 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GPC3P51654 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GPC3P51654 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.52■□□□□ 0.72
GPC3P51654 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GPC3P51654 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GPC3P51654 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.52■□□□□ 0.72
GPC3P51654 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.52■□□□□ 0.72
GPC3P51654 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.52■□□□□ 0.72
GPC3P51654 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.52■□□□□ 0.72
GPC3P51654 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 COX5BP2-201ENST00000392354 334 ntBASIC19.52■□□□□ 0.72
GPC3P51654 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
GPC3P51654 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.52■□□□□ 0.72
GPC3P51654 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GPC3P51654 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.52■□□□□ 0.72
GPC3P51654 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 AC093909.1-201ENST00000504731 1122 ntBASIC19.52■□□□□ 0.72
GPC3P51654 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 NKAPP1-205ENST00000585790 367 ntBASIC19.52■□□□□ 0.72
GPC3P51654 AD001527.2-201ENST00000622994 785 ntBASIC19.52■□□□□ 0.72
GPC3P51654 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
GPC3P51654 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.52■□□□□ 0.72
GPC3P51654 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.52■□□□□ 0.72
GPC3P51654 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.52■□□□□ 0.72
GPC3P51654 PMPCAP1-201ENST00000508114 1576 ntBASIC19.52■□□□□ 0.71
GPC3P51654 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
GPC3P51654 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GPC3P51654 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
GPC3P51654 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.52■□□□□ 0.71
GPC3P51654 AC100803.2-201ENST00000562459 1963 ntBASIC19.52■□□□□ 0.71
GPC3P51654 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
GPC3P51654 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
GPC3P51654 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC3P51654 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC3P51654 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.51■□□□□ 0.71
GPC3P51654 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
GPC3P51654 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC3P51654 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.51■□□□□ 0.71
GPC3P51654 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.51■□□□□ 0.71
GPC3P51654 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC3P51654 AC025062.2-201ENST00000605477 670 ntBASIC19.51■□□□□ 0.71
GPC3P51654 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC3P51654 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.51■□□□□ 0.71
GPC3P51654 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.51■□□□□ 0.71
GPC3P51654 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC3P51654 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC3P51654 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC3P51654 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC3P51654 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GPC3P51654 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.51■□□□□ 0.71
GPC3P51654 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GPC3P51654 AC018470.1-201ENST00000624790 3129 ntBASIC19.51■□□□□ 0.71
GPC3P51654 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
GPC3P51654 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GPC3P51654 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms