Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SSR4P51571 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.22■□□□□ 0.19
SSR4P51571 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.22■□□□□ 0.19
SSR4P51571 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.22■□□□□ 0.19
SSR4P51571 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 RPS2P28-201ENST00000314255 741 ntBASIC16.22■□□□□ 0.19
SSR4P51571 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSR4P51571 AL031284.1-201ENST00000419297 478 ntBASIC16.22■□□□□ 0.19
SSR4P51571 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR4P51571 AC093909.1-201ENST00000504731 1122 ntBASIC16.22■□□□□ 0.19
SSR4P51571 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.22■□□□□ 0.19
SSR4P51571 NKAPP1-205ENST00000585790 367 ntBASIC16.22■□□□□ 0.19
SSR4P51571 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.22■□□□□ 0.19
SSR4P51571 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR4P51571 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR4P51571 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.22■□□□□ 0.19
SSR4P51571 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SSR4P51571 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SSR4P51571 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SSR4P51571 AC135050.7-201ENST00000624508 2218 ntBASIC16.22■□□□□ 0.19
SSR4P51571 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSR4P51571 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSR4P51571 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 HLA-A-201ENST00000376802 1334 ntBASIC16.21■□□□□ 0.19
SSR4P51571 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.21■□□□□ 0.19
SSR4P51571 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.21■□□□□ 0.19
SSR4P51571 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 AL354751.1-201ENST00000412768 1863 ntBASIC16.21■□□□□ 0.19
SSR4P51571 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 AC079776.2-201ENST00000641154 1609 ntBASIC16.21■□□□□ 0.19
SSR4P51571 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR4P51571 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR4P51571 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SSR4P51571 AC018712.1-201ENST00000455767 687 ntBASIC16.21■□□□□ 0.19
SSR4P51571 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SSR4P51571 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR4P51571 IGHV3-52-201ENST00000519770 353 ntBASIC16.21■□□□□ 0.19
SSR4P51571 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR4P51571 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR4P51571 AC021087.4-201ENST00000563761 564 ntBASIC16.21■□□□□ 0.19
SSR4P51571 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.21■□□□□ 0.19
SSR4P51571 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.21■□□□□ 0.19
SSR4P51571 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SSR4P51571 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.21■□□□□ 0.19
SSR4P51571 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR4P51571 AL353593.2-201ENST00000602529 1483 ntBASIC16.21■□□□□ 0.19
SSR4P51571 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SSR4P51571 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SSR4P51571 AL049757.1-201ENST00000616842 1596 ntBASIC16.21■□□□□ 0.18
SSR4P51571 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.21■□□□□ 0.18
SSR4P51571 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SSR4P51571 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.21■□□□□ 0.18
SSR4P51571 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SSR4P51571 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SSR4P51571 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.2■□□□□ 0.18
SSR4P51571 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR4P51571 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms