Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLK2P49760 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLK2P49760 AC004817.3-201ENST00000602957 2129 ntBASIC20■□□□□ 0.79
CLK2P49760 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CLK2P49760 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CLK2P49760 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 AC026396.1-201ENST00000419388 421 ntBASIC19.99■□□□□ 0.79
CLK2P49760 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.99■□□□□ 0.79
CLK2P49760 FAM197Y8-203ENST00000450145 560 ntBASIC19.99■□□□□ 0.79
CLK2P49760 SCARNA2-201ENST00000458748 420 ntBASIC19.99■□□□□ 0.79
CLK2P49760 STK19B-204ENST00000512515 211 ntBASIC19.99■□□□□ 0.79
CLK2P49760 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.99■□□□□ 0.79
CLK2P49760 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.99■□□□□ 0.79
CLK2P49760 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK2P49760 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.99■□□□□ 0.79
CLK2P49760 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLK2P49760 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK2P49760 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CLK2P49760 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK2P49760 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK2P49760 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.99■□□□□ 0.79
CLK2P49760 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK2P49760 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.98■□□□□ 0.79
CLK2P49760 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 LYSMD4-203ENST00000378904 2122 ntBASIC19.98■□□□□ 0.79
CLK2P49760 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.98■□□□□ 0.79
CLK2P49760 KRT18P67-201ENST00000432816 1264 ntBASIC19.98■□□□□ 0.79
CLK2P49760 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 BX005266.1-201ENST00000473402 457 ntBASIC19.98■□□□□ 0.79
CLK2P49760 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.98■□□□□ 0.79
CLK2P49760 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CLK2P49760 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.98■□□□□ 0.79
CLK2P49760 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 AC148477.8-201ENST00000624298 468 ntBASIC19.98■□□□□ 0.79
CLK2P49760 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.98■□□□□ 0.79
CLK2P49760 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLK2P49760 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK2P49760 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.97■□□□□ 0.79
CLK2P49760 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.97■□□□□ 0.79
CLK2P49760 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.97■□□□□ 0.79
CLK2P49760 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 HNRNPDP1-201ENST00000439535 754 ntBASIC19.97■□□□□ 0.79
CLK2P49760 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.97■□□□□ 0.79
CLK2P49760 RNPS1P1-201ENST00000507437 918 ntBASIC19.97■□□□□ 0.79
CLK2P49760 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.97■□□□□ 0.79
CLK2P49760 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.97■□□□□ 0.79
CLK2P49760 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.97■□□□□ 0.79
CLK2P49760 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms