Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A12P48065 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC6A12P48065 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A12P48065 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC6A12P48065 FAM220CP-201ENST00000395253 831 ntBASIC17.06■□□□□ 0.32
SLC6A12P48065 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC6A12P48065 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC6A12P48065 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A12P48065 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A12P48065 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC6A12P48065 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC6A12P48065 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC6A12P48065 AP002414.4-201ENST00000589764 1148 ntBASIC17.06■□□□□ 0.32
SLC6A12P48065 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC6A12P48065 AL358472.4-201ENST00000633140 710 ntBASIC17.06■□□□□ 0.32
SLC6A12P48065 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC6A12P48065 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC6A12P48065 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A12P48065 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A12P48065 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A12P48065 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
SLC6A12P48065 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A12P48065 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.05■□□□□ 0.32
SLC6A12P48065 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A12P48065 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A12P48065 MIR3180-1-201ENST00000580374 94 ntBASIC17.05■□□□□ 0.32
SLC6A12P48065 MIR3180-3-201ENST00000584616 94 ntBASIC17.05■□□□□ 0.32
SLC6A12P48065 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 NPAP1P7-201ENST00000613027 823 ntBASIC17.05■□□□□ 0.32
SLC6A12P48065 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.05■□□□□ 0.32
SLC6A12P48065 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A12P48065 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A12P48065 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC6A12P48065 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A12P48065 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SLC6A12P48065 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A12P48065 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A12P48065 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A12P48065 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC6A12P48065 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC6A12P48065 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC6A12P48065 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC6A12P48065 AL049757.1-201ENST00000616842 1596 ntBASIC17.04■□□□□ 0.32
SLC6A12P48065 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC6A12P48065 MIR1224-201ENST00000408193 85 ntBASIC17.04■□□□□ 0.32
SLC6A12P48065 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 TOB2P1-201ENST00000469761 992 ntBASIC17.04■□□□□ 0.32
SLC6A12P48065 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A12P48065 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC6A12P48065 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms