Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT2P35908 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT2P35908 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT2P35908 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
KRT2P35908 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT2P35908 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT2P35908 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT2P35908 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT2P35908 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT2P35908 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 AC092119.3-201ENST00000612618 583 ntBASIC20.29■□□□□ 0.84
KRT2P35908 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT2P35908 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT2P35908 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT2P35908 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT2P35908 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT2P35908 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT2P35908 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.28■□□□□ 0.84
KRT2P35908 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT2P35908 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 KRT17P6-201ENST00000453795 1220 ntBASIC20.28■□□□□ 0.84
KRT2P35908 AC009533.2-201ENST00000543664 586 ntBASIC20.28■□□□□ 0.84
KRT2P35908 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
KRT2P35908 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.28■□□□□ 0.84
KRT2P35908 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
KRT2P35908 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT2P35908 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT2P35908 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT2P35908 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
KRT2P35908 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT2P35908 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 AL138688.1-201ENST00000624851 1594 ntBASIC20.27■□□□□ 0.84
KRT2P35908 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
KRT2P35908 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
KRT2P35908 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.27■□□□□ 0.84
KRT2P35908 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT2P35908 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT2P35908 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.27■□□□□ 0.84
KRT2P35908 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT2P35908 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
KRT2P35908 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KRT2P35908 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT2P35908 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KRT2P35908 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.83
KRT2P35908 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.27■□□□□ 0.83
KRT2P35908 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT2P35908 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT2P35908 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KRT2P35908 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT2P35908 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT2P35908 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT2P35908 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT2P35908 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT2P35908 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT2P35908 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT2P35908 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT2P35908 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT2P35908 FAM220CP-201ENST00000395253 831 ntBASIC20.26■□□□□ 0.83
KRT2P35908 UPK3BP1-201ENST00000428678 509 ntBASIC20.26■□□□□ 0.83
KRT2P35908 MINOS1P3-201ENST00000457048 203 ntBASIC20.26■□□□□ 0.83
KRT2P35908 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.26■□□□□ 0.83
KRT2P35908 AP000867.3-201ENST00000524675 377 ntBASIC20.26■□□□□ 0.83
KRT2P35908 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms