Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.67■□□□□ 0.58
RFC1P35251 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 AL592071.1-201ENST00000611956 408 ntBASIC18.67■□□□□ 0.58
RFC1P35251 AC124864.1-201ENST00000623408 392 ntBASIC18.67■□□□□ 0.58
RFC1P35251 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC1P35251 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 LINC00304-203ENST00000565008 1864 ntBASIC18.67■□□□□ 0.58
RFC1P35251 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 FER1L4-210ENST00000615531 5998 ntBASIC18.67■□□□□ 0.58
RFC1P35251 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFC1P35251 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RFC1P35251 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 PCED1CP-201ENST00000419887 785 ntBASIC18.66■□□□□ 0.58
RFC1P35251 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 AL845331.1-201ENST00000424978 1190 ntBASIC18.66■□□□□ 0.58
RFC1P35251 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 KRT18P35-201ENST00000510488 1269 ntBASIC18.66■□□□□ 0.58
RFC1P35251 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RFC1P35251 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 AC090616.6-201ENST00000582640 721 ntBASIC18.66■□□□□ 0.58
RFC1P35251 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 IGHV3-41-201ENST00000613121 348 ntBASIC18.66■□□□□ 0.58
RFC1P35251 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RFC1P35251 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.66■□□□□ 0.58
RFC1P35251 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC1P35251 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 AC133963.1-201ENST00000504166 1679 ntBASIC18.66■□□□□ 0.58
RFC1P35251 AC016734.2-201ENST00000624325 1377 ntBASIC18.66■□□□□ 0.58
RFC1P35251 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC1P35251 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC1P35251 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RFC1P35251 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.65■□□□□ 0.58
RFC1P35251 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
RFC1P35251 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
RFC1P35251 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RFC1P35251 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC1P35251 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFC1P35251 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC1P35251 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.65■□□□□ 0.58
RFC1P35251 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RFC1P35251 AL353801.3-201ENST00000609898 542 ntBASIC18.65■□□□□ 0.58
RFC1P35251 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC1P35251 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.65■□□□□ 0.58
RFC1P35251 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFC1P35251 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC1P35251 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.65■□□□□ 0.58
RFC1P35251 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC1P35251 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
RFC1P35251 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFC1P35251 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.64■□□□□ 0.58
RFC1P35251 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.64■□□□□ 0.58
RFC1P35251 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.64■□□□□ 0.58
RFC1P35251 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.64■□□□□ 0.57
RFC1P35251 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms