Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.49■□□□□ 0.23
GABRA3P34903 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABRA3P34903 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GABRA3P34903 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABRA3P34903 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GABRA3P34903 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GABRA3P34903 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
GABRA3P34903 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.49■□□□□ 0.23
GABRA3P34903 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.49■□□□□ 0.23
GABRA3P34903 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GABRA3P34903 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GABRA3P34903 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GABRA3P34903 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.48■□□□□ 0.23
GABRA3P34903 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GABRA3P34903 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.48■□□□□ 0.23
GABRA3P34903 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.48■□□□□ 0.23
GABRA3P34903 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
GABRA3P34903 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GABRA3P34903 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
GABRA3P34903 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 TSSC2-201ENST00000450217 709 ntBASIC16.48■□□□□ 0.23
GABRA3P34903 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.48■□□□□ 0.23
GABRA3P34903 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.48■□□□□ 0.23
GABRA3P34903 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.48■□□□□ 0.23
GABRA3P34903 AP000550.4-202ENST00000639755 178 ntBASIC16.48■□□□□ 0.23
GABRA3P34903 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GABRA3P34903 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GABRA3P34903 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.48■□□□□ 0.23
GABRA3P34903 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.48■□□□□ 0.23
GABRA3P34903 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
GABRA3P34903 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GABRA3P34903 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.47■□□□□ 0.23
GABRA3P34903 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.47■□□□□ 0.23
GABRA3P34903 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.47■□□□□ 0.23
GABRA3P34903 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.47■□□□□ 0.23
GABRA3P34903 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.47■□□□□ 0.23
GABRA3P34903 BX276092.7-203ENST00000637198 1536 ntBASIC16.47■□□□□ 0.23
GABRA3P34903 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
GABRA3P34903 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GABRA3P34903 AC096633.1-201ENST00000422446 749 ntBASIC16.47■□□□□ 0.23
GABRA3P34903 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.47■□□□□ 0.23
GABRA3P34903 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.47■□□□□ 0.23
GABRA3P34903 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.47■□□□□ 0.23
GABRA3P34903 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.47■□□□□ 0.23
GABRA3P34903 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GABRA3P34903 REXO1L11P-201ENST00000620964 1927 ntBASIC16.47■□□□□ 0.23
GABRA3P34903 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA3P34903 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
GABRA3P34903 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 AC133963.1-201ENST00000504166 1679 ntBASIC16.46■□□□□ 0.23
GABRA3P34903 KRT18P1-202ENST00000452408 1331 ntBASIC16.46■□□□□ 0.23
GABRA3P34903 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.46■□□□□ 0.23
GABRA3P34903 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.46■□□□□ 0.23
GABRA3P34903 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GABRA3P34903 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
GABRA3P34903 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 AL845331.1-201ENST00000424978 1190 ntBASIC16.46■□□□□ 0.23
GABRA3P34903 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.46■□□□□ 0.23
GABRA3P34903 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.46■□□□□ 0.23
GABRA3P34903 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.46■□□□□ 0.23
GABRA3P34903 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.46■□□□□ 0.23
GABRA3P34903 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.46■□□□□ 0.23
GABRA3P34903 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.46■□□□□ 0.23
GABRA3P34903 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.46■□□□□ 0.23
GABRA3P34903 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.46■□□□□ 0.23
GABRA3P34903 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GABRA3P34903 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA3P34903 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms