Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.24■□□□□ 0.51
BRAFP15056 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.24■□□□□ 0.51
BRAFP15056 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.24■□□□□ 0.51
BRAFP15056 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.24■□□□□ 0.51
BRAFP15056 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.24■□□□□ 0.51
BRAFP15056 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.24■□□□□ 0.51
BRAFP15056 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BRAFP15056 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
BRAFP15056 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRAFP15056 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BRAFP15056 AL118508.1-201ENST00000613502 2345 ntBASIC18.23■□□□□ 0.51
BRAFP15056 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BRAFP15056 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.23■□□□□ 0.51
BRAFP15056 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.23■□□□□ 0.51
BRAFP15056 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.23■□□□□ 0.51
BRAFP15056 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.23■□□□□ 0.51
BRAFP15056 LINC01238-205ENST00000567549 1107 ntBASIC18.23■□□□□ 0.51
BRAFP15056 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.23■□□□□ 0.51
BRAFP15056 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.23■□□□□ 0.51
BRAFP15056 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
BRAFP15056 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRAFP15056 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
BRAFP15056 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BRAFP15056 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
BRAFP15056 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 AL138688.1-201ENST00000624851 1594 ntBASIC18.22■□□□□ 0.51
BRAFP15056 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 AC009102.3-201ENST00000623118 1491 ntBASIC18.22■□□□□ 0.51
BRAFP15056 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.22■□□□□ 0.51
BRAFP15056 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BRAFP15056 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.22■□□□□ 0.51
BRAFP15056 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
BRAFP15056 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
BRAFP15056 SEC1P-202ENST00000473944 940 ntBASIC18.22■□□□□ 0.51
BRAFP15056 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 AC087388.1-201ENST00000571370 1112 ntBASIC18.22■□□□□ 0.51
BRAFP15056 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.22■□□□□ 0.51
BRAFP15056 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.22■□□□□ 0.51
BRAFP15056 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
BRAFP15056 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 CROCCP2-202ENST00000412962 2773 ntBASIC18.22■□□□□ 0.51
BRAFP15056 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.22■□□□□ 0.51
BRAFP15056 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRAFP15056 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.22■□□□□ 0.51
BRAFP15056 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.22■□□□□ 0.51
BRAFP15056 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.21■□□□□ 0.51
BRAFP15056 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.21■□□□□ 0.51
BRAFP15056 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BRAFP15056 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRAFP15056 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.21■□□□□ 0.51
BRAFP15056 AL031133.1-201ENST00000406807 723 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms