Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL4P13236 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL4P13236 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
CCL4P13236 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL4P13236 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL4P13236 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCL4P13236 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL4P13236 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCL4P13236 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CCL4P13236 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL4P13236 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL4P13236 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL4P13236 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.64■□□□□ 0.25
CCL4P13236 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CCL4P13236 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCL4P13236 MIR4469-201ENST00000583919 79 ntBASIC16.64■□□□□ 0.25
CCL4P13236 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL4P13236 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL4P13236 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCL4P13236 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCL4P13236 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL4P13236 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL4P13236 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL4P13236 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL4P13236 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL4P13236 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCL4P13236 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.63■□□□□ 0.25
CCL4P13236 PRSS29P-201ENST00000440800 595 ntBASIC16.63■□□□□ 0.25
CCL4P13236 AP006288.1-201ENST00000446065 395 ntBASIC16.63■□□□□ 0.25
CCL4P13236 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.63■□□□□ 0.25
CCL4P13236 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL4P13236 IGHV3-52-201ENST00000519770 353 ntBASIC16.63■□□□□ 0.25
CCL4P13236 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL4P13236 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL4P13236 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 AP000997.3-201ENST00000623333 2250 ntBASIC16.63■□□□□ 0.25
CCL4P13236 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL4P13236 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 AL020996.1-203ENST00000536896 2307 ntBASIC16.63■□□□□ 0.25
CCL4P13236 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL4P13236 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCL4P13236 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCL4P13236 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCL4P13236 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CCL4P13236 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL4P13236 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 PTCHD3P3-201ENST00000403073 906 ntBASIC16.62■□□□□ 0.25
CCL4P13236 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CCL4P13236 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL4P13236 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CCL4P13236 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL4P13236 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CCL4P13236 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL4P13236 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCL4P13236 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL4P13236 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL4P13236 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL4P13236 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCL4P13236 AC009336.1-201ENST00000608941 1553 ntBASIC16.61■□□□□ 0.25
CCL4P13236 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL4P13236 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL4P13236 IGLL3P-201ENST00000412472 434 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms