Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLPTM1O96005 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1O96005 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1O96005 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1O96005 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1O96005 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1O96005 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1O96005 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1O96005 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1O96005 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1O96005 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.77■□□□□ 0.27
CLPTM1O96005 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1O96005 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.77■□□□□ 0.27
CLPTM1O96005 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPTM1O96005 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CLPTM1O96005 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
CLPTM1O96005 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 AL357033.4-201ENST00000617703 1807 ntBASIC16.76■□□□□ 0.27
CLPTM1O96005 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.76■□□□□ 0.27
CLPTM1O96005 RPS2P55-201ENST00000397318 883 ntBASIC16.76■□□□□ 0.27
CLPTM1O96005 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CLPTM1O96005 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.76■□□□□ 0.27
CLPTM1O96005 AC107956.1-201ENST00000494359 873 ntBASIC16.76■□□□□ 0.27
CLPTM1O96005 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.76■□□□□ 0.27
CLPTM1O96005 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLPTM1O96005 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.76■□□□□ 0.27
CLPTM1O96005 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.76■□□□□ 0.27
CLPTM1O96005 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 MYLKP1-201ENST00000509077 1580 ntBASIC16.76■□□□□ 0.27
CLPTM1O96005 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLPTM1O96005 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.76■□□□□ 0.27
CLPTM1O96005 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLPTM1O96005 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLPTM1O96005 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 PHGDH-209ENST00000641074 1780 ntBASIC16.75■□□□□ 0.27
CLPTM1O96005 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPTM1O96005 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPTM1O96005 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.75■□□□□ 0.27
CLPTM1O96005 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLPTM1O96005 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLPTM1O96005 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
CLPTM1O96005 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPTM1O96005 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLPTM1O96005 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPTM1O96005 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms