Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC103564.2-201ENST00000432853 1299 ntBASIC16.33■□□□□ 0.2
NKX2-2O95096 LINC00265-3P-201ENST00000447588 903 ntBASIC16.33■□□□□ 0.2
NKX2-2O95096 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-2O95096 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.33■□□□□ 0.2
NKX2-2O95096 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
NKX2-2O95096 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-2O95096 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NKX2-2O95096 AC011467.2-201ENST00000598425 242 ntBASIC16.33■□□□□ 0.2
NKX2-2O95096 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NKX2-2O95096 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX2-2O95096 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-2O95096 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX2-2O95096 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
NKX2-2O95096 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NKX2-2O95096 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NKX2-2O95096 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX2-2O95096 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NKX2-2O95096 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NKX2-2O95096 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX2-2O95096 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.32■□□□□ 0.2
NKX2-2O95096 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 SIRPAP1-201ENST00000448467 1770 ntBASIC16.32■□□□□ 0.2
NKX2-2O95096 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.32■□□□□ 0.2
NKX2-2O95096 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX2-2O95096 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX2-2O95096 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.32■□□□□ 0.2
NKX2-2O95096 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.32■□□□□ 0.2
NKX2-2O95096 AL139327.4-201ENST00000612362 153 ntBASIC16.32■□□□□ 0.2
NKX2-2O95096 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX2-2O95096 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX2-2O95096 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX2-2O95096 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX2-2O95096 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
NKX2-2O95096 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 NSUN5P1-202ENST00000421140 1535 ntBASIC16.31■□□□□ 0.2
NKX2-2O95096 NSUN5P2-203ENST00000457352 1529 ntBASIC16.31■□□□□ 0.2
NKX2-2O95096 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX2-2O95096 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX2-2O95096 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NKX2-2O95096 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NKX2-2O95096 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX2-2O95096 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX2-2O95096 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.31■□□□□ 0.2
NKX2-2O95096 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX2-2O95096 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX2-2O95096 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NKX2-2O95096 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX2-2O95096 AC141586.5-201ENST00000624546 2050 ntBASIC16.31■□□□□ 0.2
NKX2-2O95096 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 AC139713.2-201ENST00000641328 2723 ntBASIC16.31■□□□□ 0.2
NKX2-2O95096 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX2-2O95096 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-2O95096 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-2O95096 AL049757.1-201ENST00000616842 1596 ntBASIC16.3■□□□□ 0.2
NKX2-2O95096 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms