Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.94■□□□□ 0.46
USP1O94782 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
USP1O94782 REXO1L11P-201ENST00000620964 1927 ntBASIC17.94■□□□□ 0.46
USP1O94782 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.94■□□□□ 0.46
USP1O94782 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 KRT18P57-201ENST00000443599 1254 ntBASIC17.94■□□□□ 0.46
USP1O94782 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.94■□□□□ 0.46
USP1O94782 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
USP1O94782 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.94■□□□□ 0.46
USP1O94782 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.94■□□□□ 0.46
USP1O94782 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.94■□□□□ 0.46
USP1O94782 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.94■□□□□ 0.46
USP1O94782 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.94■□□□□ 0.46
USP1O94782 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
USP1O94782 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP1O94782 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.93■□□□□ 0.46
USP1O94782 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USP1O94782 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
USP1O94782 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.93■□□□□ 0.46
USP1O94782 AC117947.1-201ENST00000427448 529 ntBASIC17.93■□□□□ 0.46
USP1O94782 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.93■□□□□ 0.46
USP1O94782 AL049597.2-201ENST00000565575 961 ntBASIC17.93■□□□□ 0.46
USP1O94782 AL590326.2-201ENST00000625139 305 ntBASIC17.93■□□□□ 0.46
USP1O94782 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USP1O94782 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
USP1O94782 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USP1O94782 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
USP1O94782 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USP1O94782 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP1O94782 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.92■□□□□ 0.46
USP1O94782 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
USP1O94782 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP1O94782 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.92■□□□□ 0.46
USP1O94782 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USP1O94782 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
USP1O94782 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP1O94782 TSPY12P-201ENST00000421279 868 ntBASIC17.92■□□□□ 0.46
USP1O94782 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
USP1O94782 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.92■□□□□ 0.46
USP1O94782 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.92■□□□□ 0.46
USP1O94782 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.92■□□□□ 0.46
USP1O94782 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.92■□□□□ 0.46
USP1O94782 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.92■□□□□ 0.46
USP1O94782 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP1O94782 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP1O94782 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.91■□□□□ 0.46
USP1O94782 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
USP1O94782 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms