Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 AP005117.1-201ENST00000584346 1413 ntBASIC18.1■□□□□ 0.49
SYNCRIPO60506 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 RNA5SP419-201ENST00000515908 135 ntBASIC18.1■□□□□ 0.49
SYNCRIPO60506 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNCRIPO60506 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNCRIPO60506 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 AC018712.1-201ENST00000455767 687 ntBASIC18.09■□□□□ 0.49
SYNCRIPO60506 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 AF228730.7-201ENST00000641842 219 ntBASIC18.09■□□□□ 0.49
SYNCRIPO60506 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SYNCRIPO60506 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SYNCRIPO60506 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNCRIPO60506 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
SYNCRIPO60506 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNCRIPO60506 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYNCRIPO60506 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.08■□□□□ 0.49
SYNCRIPO60506 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNCRIPO60506 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 FAM220CP-201ENST00000395253 831 ntBASIC18.08■□□□□ 0.48
SYNCRIPO60506 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYNCRIPO60506 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNCRIPO60506 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNCRIPO60506 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNCRIPO60506 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYNCRIPO60506 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.08■□□□□ 0.48
SYNCRIPO60506 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNCRIPO60506 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNCRIPO60506 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms