Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAF3IP2O43734 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 AC233702.3-201ENST00000578656 1387 ntBASIC15.78■□□□□ 0.12
TRAF3IP2O43734 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 MIR3180-1-201ENST00000580374 94 ntBASIC15.78■□□□□ 0.12
TRAF3IP2O43734 MIR3180-3-201ENST00000584616 94 ntBASIC15.78■□□□□ 0.12
TRAF3IP2O43734 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 LINC01451-201ENST00000623792 534 ntBASIC15.78■□□□□ 0.12
TRAF3IP2O43734 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAF3IP2O43734 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 COX5BP2-201ENST00000392354 334 ntBASIC15.77■□□□□ 0.12
TRAF3IP2O43734 AC005104.2-201ENST00000427818 678 ntBASIC15.77■□□□□ 0.12
TRAF3IP2O43734 AC007967.3-201ENST00000434308 558 ntBASIC15.77■□□□□ 0.12
TRAF3IP2O43734 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 TOB2P1-201ENST00000469761 992 ntBASIC15.77■□□□□ 0.12
TRAF3IP2O43734 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAF3IP2O43734 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAF3IP2O43734 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 ATP5G2P1-201ENST00000433580 426 ntBASIC15.76■□□□□ 0.11
TRAF3IP2O43734 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAF3IP2O43734 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms