Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
UBFD1O14562 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 HCG11-201ENST00000411553 5696 ntBASIC17.17■□□□□ 0.34
UBFD1O14562 AC106886.4-201ENST00000623557 2502 ntBASIC17.17■□□□□ 0.34
UBFD1O14562 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
UBFD1O14562 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.17■□□□□ 0.34
UBFD1O14562 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.17■□□□□ 0.34
UBFD1O14562 LIN28AP1-201ENST00000429574 405 ntBASIC17.17■□□□□ 0.34
UBFD1O14562 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.17■□□□□ 0.34
UBFD1O14562 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 AC068472.1-201ENST00000474589 881 ntBASIC17.17■□□□□ 0.34
UBFD1O14562 YBX1P2-201ENST00000489612 999 ntBASIC17.17■□□□□ 0.34
UBFD1O14562 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.17■□□□□ 0.34
UBFD1O14562 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.17■□□□□ 0.34
UBFD1O14562 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.17■□□□□ 0.34
UBFD1O14562 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
UBFD1O14562 AC012306.2-201ENST00000609350 630 ntBASIC17.17■□□□□ 0.34
UBFD1O14562 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
UBFD1O14562 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
UBFD1O14562 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
UBFD1O14562 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.17■□□□□ 0.34
UBFD1O14562 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBFD1O14562 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBFD1O14562 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
UBFD1O14562 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBFD1O14562 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UBFD1O14562 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.16■□□□□ 0.34
UBFD1O14562 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.16■□□□□ 0.34
UBFD1O14562 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 AC073508.3-201ENST00000619697 1419 ntBASIC17.16■□□□□ 0.34
UBFD1O14562 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 MIR662-201ENST00000384847 95 ntBASIC17.16■□□□□ 0.34
UBFD1O14562 MTCL1P1-201ENST00000446207 792 ntBASIC17.16■□□□□ 0.34
UBFD1O14562 ATP5G1P1-201ENST00000448724 379 ntBASIC17.16■□□□□ 0.34
UBFD1O14562 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 AP003733.1-201ENST00000491725 852 ntBASIC17.16■□□□□ 0.34
UBFD1O14562 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.16■□□□□ 0.34
UBFD1O14562 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.16■□□□□ 0.34
UBFD1O14562 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
UBFD1O14562 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
UBFD1O14562 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.16■□□□□ 0.34
UBFD1O14562 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.16■□□□□ 0.34
UBFD1O14562 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UBFD1O14562 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBFD1O14562 AL353692.3-201ENST00000407031 1396 ntBASIC17.15■□□□□ 0.34
UBFD1O14562 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.15■□□□□ 0.34
UBFD1O14562 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
UBFD1O14562 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.15■□□□□ 0.34
UBFD1O14562 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UBFD1O14562 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBFD1O14562 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 TERF1P1-201ENST00000311003 1181 ntBASIC17.15■□□□□ 0.34
UBFD1O14562 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.15■□□□□ 0.34
UBFD1O14562 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 AC117947.1-201ENST00000427448 529 ntBASIC17.15■□□□□ 0.34
UBFD1O14562 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 KRT18P38-201ENST00000449496 1282 ntBASIC17.15■□□□□ 0.34
UBFD1O14562 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.15■□□□□ 0.34
UBFD1O14562 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.15■□□□□ 0.34
UBFD1O14562 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.15■□□□□ 0.34
UBFD1O14562 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.15■□□□□ 0.34
UBFD1O14562 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.15■□□□□ 0.34
UBFD1O14562 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBFD1O14562 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms