Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SDHDO14521 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SDHDO14521 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SDHDO14521 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.1■□□□□ 0.33
SDHDO14521 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.1■□□□□ 0.33
SDHDO14521 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHDO14521 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHDO14521 AL512604.3-201ENST00000569583 964 ntBASIC17.1■□□□□ 0.33
SDHDO14521 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 LINC01311-201ENST00000565162 1445 ntBASIC17.1■□□□□ 0.33
SDHDO14521 PCDHB19P-201ENST00000570871 2371 ntBASIC17.1■□□□□ 0.33
SDHDO14521 AC018695.7-201ENST00000624587 2492 ntBASIC17.1■□□□□ 0.33
SDHDO14521 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 BX276092.7-203ENST00000637198 1536 ntBASIC17.1■□□□□ 0.33
SDHDO14521 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHDO14521 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHDO14521 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SDHDO14521 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SDHDO14521 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 PCDHA14-201ENST00000506751 2298 ntBASIC17.09■□□□□ 0.33
SDHDO14521 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SDHDO14521 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 MIR718-201ENST00000390190 70 ntBASIC17.09■□□□□ 0.33
SDHDO14521 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.09■□□□□ 0.33
SDHDO14521 ECEL1P2-202ENST00000465689 757 ntBASIC17.09■□□□□ 0.33
SDHDO14521 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.09■□□□□ 0.33
SDHDO14521 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.09■□□□□ 0.33
SDHDO14521 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SDHDO14521 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.09■□□□□ 0.33
SDHDO14521 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SDHDO14521 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHDO14521 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SDHDO14521 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
SDHDO14521 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 FLJ38576-201ENST00000623820 2459 ntBASIC17.08■□□□□ 0.33
SDHDO14521 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SDHDO14521 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.08■□□□□ 0.33
SDHDO14521 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.08■□□□□ 0.32
SDHDO14521 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.08■□□□□ 0.32
SDHDO14521 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.08■□□□□ 0.32
SDHDO14521 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.08■□□□□ 0.32
SDHDO14521 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SDHDO14521 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.08■□□□□ 0.32
SDHDO14521 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SDHDO14521 HMGA1P5-201ENST00000412453 271 ntBASIC17.08■□□□□ 0.32
SDHDO14521 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.08■□□□□ 0.32
SDHDO14521 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.08■□□□□ 0.32
SDHDO14521 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.08■□□□□ 0.32
SDHDO14521 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
SDHDO14521 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SDHDO14521 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SDHDO14521 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms