Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV5-3A0A0A0MS03 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 FLJ38576-201ENST00000623820 2459 ntBASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 STARP1-201ENST00000397973 869 ntBASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLC25A3P1-201ENST00000443844 931 ntBASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV5-3A0A0A0MS03 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC005915.1-201ENST00000624912 2018 ntBASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 AL353692.3-201ENST00000407031 1396 ntBASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 MIR662-201ENST00000384847 95 ntBASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 AC092597.1-201ENST00000487352 616 ntBASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
TRBV5-3A0A0A0MS03 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms