Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 AL513210.1-201ENST00000629608 234 ntBASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 AL020996.1-203ENST00000536896 2307 ntBASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN10AQ9Y5Y9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 AC022145.2-201ENST00000598203 171 ntBASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 REXO1L9P-201ENST00000604264 2108 ntBASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 AC004461.1-201ENST00000412461 403 ntBASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 AC093028.1-201ENST00000622998 982 ntBASIC19.23■□□□□ 0.67
SCN10AQ9Y5Y9 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 PAWRP1-201ENST00000451083 565 ntBASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN10AQ9Y5Y9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 AC023141.5-201ENST00000458585 616 ntBASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 CXCL1P1-201ENST00000502804 216 ntBASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.21■□□□□ 0.67
SCN10AQ9Y5Y9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms