Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TSPY7P-201ENST00000431358 1114 ntBASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 DUTP2-201ENST00000519164 463 ntBASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB1Q9Y5G3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
PCDHGB1Q9Y5G3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 CROCCP1-201ENST00000426910 5675 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 KRT17P2-201ENST00000300992 1314 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 AL356309.3-201ENST00000624132 1934 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 AC008040.2-201ENST00000461049 708 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 AC009065.1-201ENST00000564055 1225 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 AP000692.2-201ENST00000608391 879 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 MIR6786-201ENST00000616843 113 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 AC133561.5-201ENST00000635547 218 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 FSCN1P1-201ENST00000568912 1481 ntBASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB1Q9Y5G3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 MIR3180-5-201ENST00000583743 153 ntBASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 AC073195.1-201ENST00000607241 877 ntBASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 KRT8P7-201ENST00000533003 1432 ntBASIC16.25■□□□□ 0.19
PCDHGB1Q9Y5G3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms