Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 UPK3BP1-201ENST00000428678 509 ntBASIC17.82■□□□□ 0.44
PKP3Q9Y446 DRAXINP1-201ENST00000437611 948 ntBASIC17.82■□□□□ 0.44
PKP3Q9Y446 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP3Q9Y446 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 AL353801.3-201ENST00000609898 542 ntBASIC17.82■□□□□ 0.44
PKP3Q9Y446 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP3Q9Y446 AC093458.2-201ENST00000623150 629 ntBASIC17.82■□□□□ 0.44
PKP3Q9Y446 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP3Q9Y446 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP3Q9Y446 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PKP3Q9Y446 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PKP3Q9Y446 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.82■□□□□ 0.44
PKP3Q9Y446 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 AP002383.4-201ENST00000442518 975 ntBASIC17.81■□□□□ 0.44
PKP3Q9Y446 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 Z69720.1-201ENST00000601483 472 ntBASIC17.81■□□□□ 0.44
PKP3Q9Y446 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PKP3Q9Y446 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.81■□□□□ 0.44
PKP3Q9Y446 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 LTB4R2-202ENST00000528054 3092 ntBASIC17.8■□□□□ 0.44
PKP3Q9Y446 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.8■□□□□ 0.44
PKP3Q9Y446 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PKP3Q9Y446 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 AC233702.3-201ENST00000578656 1387 ntBASIC17.79■□□□□ 0.44
PKP3Q9Y446 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
PKP3Q9Y446 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PKP3Q9Y446 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms