Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC103564.2-201ENST00000432853 1299 ntBASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 MIR5100-201ENST00000579544 119 ntBASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHA4Q9UN74 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 PCDHB18P-201ENST00000524813 2368 ntBASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 AC005332.8-201ENST00000622750 2735 ntBASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 AC002558.1-201ENST00000488906 803 ntBASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCDHA4Q9UN74 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 AL049757.1-201ENST00000616842 1596 ntBASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 KRT16P4-201ENST00000453883 522 ntBASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 CLEC4GP1-201ENST00000596555 870 ntBASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDHA4Q9UN74 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 PRELID1P1-202ENST00000567272 903 ntBASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 AC109462.3-201ENST00000573934 613 ntBASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 AC012313.10-201ENST00000623509 926 ntBASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHA4Q9UN74 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms