Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.97■□□□□ 0.31
NIPSNAP3AQ9UFN0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 HLA-J-201ENST00000462773 1622 ntBASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 Z99916.2-201ENST00000604037 246 ntBASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPSNAP3AQ9UFN0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NIPSNAP3AQ9UFN0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 PKD1P5-201ENST00000532415 10291 ntBASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 MIR1238-201ENST00000408483 83 ntBASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 SEC1P-202ENST00000473944 940 ntBASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 FITM1-202ENST00000559294 800 ntBASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 NKILA-202ENST00000614771 2598 ntBASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
NIPSNAP3AQ9UFN0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms