Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COL20A1Q9P218 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL20A1Q9P218 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 ELK2BP-201ENST00000415014 1224 ntBASIC19.97■□□□□ 0.79
COL20A1Q9P218 AC009947.1-201ENST00000444350 727 ntBASIC19.97■□□□□ 0.79
COL20A1Q9P218 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 PGAM5P1-201ENST00000518923 814 ntBASIC19.97■□□□□ 0.79
COL20A1Q9P218 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 AC140113.2-201ENST00000604370 208 ntBASIC19.97■□□□□ 0.79
COL20A1Q9P218 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL20A1Q9P218 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 AL589182.2-201ENST00000619332 1049 ntBASIC19.97■□□□□ 0.79
COL20A1Q9P218 AC004706.3-202ENST00000621574 984 ntBASIC19.97■□□□□ 0.79
COL20A1Q9P218 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL20A1Q9P218 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 AC006504.4-201ENST00000592118 1568 ntBASIC19.96■□□□□ 0.79
COL20A1Q9P218 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 AC005104.2-201ENST00000427818 678 ntBASIC19.96■□□□□ 0.79
COL20A1Q9P218 AC002558.1-201ENST00000488906 803 ntBASIC19.96■□□□□ 0.79
COL20A1Q9P218 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 AC006557.2-201ENST00000592985 1240 ntBASIC19.96■□□□□ 0.79
COL20A1Q9P218 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL20A1Q9P218 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL20A1Q9P218 AC009336.1-201ENST00000608941 1553 ntBASIC19.95■□□□□ 0.78
COL20A1Q9P218 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 SIGLEC30P-201ENST00000455569 941 ntBASIC19.95■□□□□ 0.78
COL20A1Q9P218 STK19B-204ENST00000512515 211 ntBASIC19.95■□□□□ 0.78
COL20A1Q9P218 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL20A1Q9P218 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL20A1Q9P218 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL20A1Q9P218 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL20A1Q9P218 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL20A1Q9P218 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL20A1Q9P218 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 IGHV3-52-201ENST00000519770 353 ntBASIC19.94■□□□□ 0.78
COL20A1Q9P218 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms