Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.49■□□□□ 0.39
MKS1Q9NXB0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 TSPY20P-201ENST00000450910 630 ntBASIC17.49■□□□□ 0.39
MKS1Q9NXB0 AC112698.1-201ENST00000510299 916 ntBASIC17.49■□□□□ 0.39
MKS1Q9NXB0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 FAM87A-204ENST00000613235 858 ntBASIC17.49■□□□□ 0.39
MKS1Q9NXB0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 PCDHA14-201ENST00000506751 2298 ntBASIC17.49■□□□□ 0.39
MKS1Q9NXB0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MKS1Q9NXB0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 HMGA1P5-201ENST00000412453 271 ntBASIC17.48■□□□□ 0.39
MKS1Q9NXB0 AC002558.1-201ENST00000488906 803 ntBASIC17.48■□□□□ 0.39
MKS1Q9NXB0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 FLJ38576-201ENST00000623820 2459 ntBASIC17.48■□□□□ 0.39
MKS1Q9NXB0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
MKS1Q9NXB0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 AC005915.1-201ENST00000624912 2018 ntBASIC17.47■□□□□ 0.39
MKS1Q9NXB0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 TSPY7P-201ENST00000431358 1114 ntBASIC17.47■□□□□ 0.39
MKS1Q9NXB0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MKS1Q9NXB0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms