Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 STK19B-204ENST00000512515 211 ntBASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 KRT19P2-202ENST00000557173 1012 ntBASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 OR7E47P-204ENST00000575924 449 ntBASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 MIR3197-201ENST00000582241 73 ntBASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 AC027612.4-201ENST00000605371 583 ntBASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRMT13Q9NUP7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 AC009949.1-201ENST00000623048 1830 ntBASIC19.33■□□□□ 0.69
TRMT13Q9NUP7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 AC096734.2-201ENST00000562054 433 ntBASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRMT13Q9NUP7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.32■□□□□ 0.68
TRMT13Q9NUP7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms