Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 BX005266.1-201ENST00000473402 457 ntBASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 MTDHP4-201ENST00000600287 670 ntBASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 HLA-J-201ENST00000462773 1622 ntBASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 AC004817.3-201ENST00000602957 2129 ntBASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 STK19B-204ENST00000512515 211 ntBASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 NOC2LP2-201ENST00000407594 1944 ntBASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSNK1G1Q9HCP0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.46■□□□□ 0.54
CSNK1G1Q9HCP0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CSNK1G1Q9HCP0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 AL031284.1-201ENST00000419297 478 ntBASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 AL355312.1-201ENST00000407115 2176 ntBASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSNK1G1Q9HCP0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 AC133963.1-201ENST00000504166 1679 ntBASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 SIGLEC30P-201ENST00000455569 941 ntBASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.44■□□□□ 0.54
CSNK1G1Q9HCP0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms