Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 BX088651.1-201ENST00000540551 451 ntBASIC19.8■□□□□ 0.76
CBX8Q9HC52 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 DOC2GP-204ENST00000639052 2548 ntBASIC19.8■□□□□ 0.76
CBX8Q9HC52 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX8Q9HC52 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX8Q9HC52 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 RPS2P55-201ENST00000397318 883 ntBASIC19.79■□□□□ 0.76
CBX8Q9HC52 AC007663.1-201ENST00000438948 1240 ntBASIC19.79■□□□□ 0.76
CBX8Q9HC52 AC107956.1-201ENST00000494359 873 ntBASIC19.79■□□□□ 0.76
CBX8Q9HC52 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CBX8Q9HC52 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX8Q9HC52 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.78■□□□□ 0.76
CBX8Q9HC52 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.78■□□□□ 0.76
CBX8Q9HC52 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.78■□□□□ 0.76
CBX8Q9HC52 FAM201B-201ENST00000458407 597 ntBASIC19.78■□□□□ 0.76
CBX8Q9HC52 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.78■□□□□ 0.76
CBX8Q9HC52 AC008687.5-201ENST00000593746 558 ntBASIC19.78■□□□□ 0.76
CBX8Q9HC52 AC024243.1-201ENST00000609234 778 ntBASIC19.78■□□□□ 0.76
CBX8Q9HC52 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
CBX8Q9HC52 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
CBX8Q9HC52 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CBX8Q9HC52 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX8Q9HC52 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 AC046185.3-201ENST00000623228 1824 ntBASIC19.77■□□□□ 0.76
CBX8Q9HC52 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 AL355355.2-201ENST00000442321 338 ntBASIC19.77■□□□□ 0.76
CBX8Q9HC52 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CBX8Q9HC52 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX8Q9HC52 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms