Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.1■□□□□ 0.65
NXF3Q9H4D5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 AL020989.1-201ENST00000422979 469 ntBASIC19.09■□□□□ 0.65
NXF3Q9H4D5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 AC105339.3-201ENST00000560043 636 ntBASIC19.09■□□□□ 0.65
NXF3Q9H4D5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NXF3Q9H4D5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.08■□□□□ 0.65
NXF3Q9H4D5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 AC104109.2-201ENST00000602919 1418 ntBASIC19.08■□□□□ 0.64
NXF3Q9H4D5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.08■□□□□ 0.64
NXF3Q9H4D5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NXF3Q9H4D5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 PRYP5-201ENST00000451909 266 ntBASIC19.07■□□□□ 0.64
NXF3Q9H4D5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 STK25P1-201ENST00000585406 838 ntBASIC19.07■□□□□ 0.64
NXF3Q9H4D5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 AC023511.2-201ENST00000618803 211 ntBASIC19.07■□□□□ 0.64
NXF3Q9H4D5 AC117500.6-201ENST00000624871 588 ntBASIC19.07■□□□□ 0.64
NXF3Q9H4D5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NXF3Q9H4D5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms