Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AL355312.1-201ENST00000407115 2176 ntBASIC16.35■□□□□ 0.21
TRIM2Q9C040 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM2Q9C040 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM2Q9C040 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 AC020916.1-201ENST00000587762 1774 ntBASIC16.34■□□□□ 0.21
TRIM2Q9C040 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM2Q9C040 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM2Q9C040 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM2Q9C040 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM2Q9C040 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM2Q9C040 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM2Q9C040 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM2Q9C040 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM2Q9C040 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TRIM2Q9C040 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.33■□□□□ 0.21
TRIM2Q9C040 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM2Q9C040 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TRIM2Q9C040 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM2Q9C040 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM2Q9C040 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 MIR662-201ENST00000384847 95 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 AC092597.1-201ENST00000487352 616 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 AP003733.1-201ENST00000491725 852 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 AC091076.1-201ENST00000610741 619 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 LINC01451-201ENST00000623792 534 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 AL358472.4-201ENST00000633140 710 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 FZD10-202ENST00000539839 3282 ntBASIC16.33■□□□□ 0.2
TRIM2Q9C040 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM2Q9C040 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM2Q9C040 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM2Q9C040 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM2Q9C040 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms