Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 AL450487.1-201ENST00000426799 995 ntBASIC18.78■□□□□ 0.6
TWNKQ96RR1 AC005104.2-201ENST00000427818 678 ntBASIC18.78■□□□□ 0.6
TWNKQ96RR1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TWNKQ96RR1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TWNKQ96RR1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 AC109462.3-201ENST00000573934 613 ntBASIC18.77■□□□□ 0.6
TWNKQ96RR1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 AD001527.2-201ENST00000622994 785 ntBASIC18.77■□□□□ 0.6
TWNKQ96RR1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.77■□□□□ 0.6
TWNKQ96RR1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TWNKQ96RR1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TWNKQ96RR1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TWNKQ96RR1 LINC00896-202ENST00000609602 2128 ntBASIC18.76■□□□□ 0.59
TWNKQ96RR1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TWNKQ96RR1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.75■□□□□ 0.59
TWNKQ96RR1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TWNKQ96RR1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.75■□□□□ 0.59
TWNKQ96RR1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TWNKQ96RR1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TWNKQ96RR1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms